STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIPILipase I. (449 aa)    
Predicted Functional Partners:
GCSH
Glycine cleavage system protein H.
  
 
  0.683
NADK
NAD kinase.
  
 
  0.677
GLDC
Glycine decarboxylase.
  
 
  0.676
SEPHS1
Selenophosphate synthetase 1.
  
 
  0.607
PDHB
Pyruvate dehydrogenase E1 beta subunit.
     
 0.605
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
     
 0.597
PISD
Phosphatidylserine decarboxylase.
    
  0.577
OGDH
Oxoglutarate dehydrogenase.
    
  0.570
DHTKD1
Dehydrogenase E1 and transketolase domain containing 1.
    
  0.570
OGDHL
Oxoglutarate dehydrogenase like.
    
  0.570
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.