STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATRATR serine/threonine kinase. (2658 aa)    
Predicted Functional Partners:
WRN
WRN RecQ like helicase.
   
 0.999
ATM
ATM serine/threonine kinase.
   
0.999
CHEK2
Checkpoint kinase 2.
    
 0.998
CHEK1
Checkpoint kinase 1.
    
 0.998
SLF1
SMC5-SMC6 complex localization factor 1.
    
 0.998
ATRIP
ATR interacting protein.
    
 0.998
ENSZALP00000017618
annotation not available
   
 0.996
CDC7
Cell division cycle 7.
    
 0.991
TELO2
Telomere maintenance 2.
    
 0.988
BRCA1
BRCA1 DNA repair associated.
   
 0.988
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.