STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX1Peroxisomal biogenesis factor 1. (1289 aa)    
Predicted Functional Partners:
PEX6
Peroxisomal biogenesis factor 6.
  
0.999
UBXN7
UBX domain protein 7.
   
 0.991
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.988
PEX13
Peroxisomal biogenesis factor 13.
    
 0.933
PEX12
Peroxisomal biogenesis factor 12.
    
 0.925
PEX14
Peroxisomal biogenesis factor 14.
    
 0.924
PEX10
Peroxisomal biogenesis factor 10.
   
 0.916
PEX5
Peroxisomal biogenesis factor 5.
   
 0.904
PEX5L
Peroxisomal biogenesis factor 5 like.
   
 0.899
FAM185A
Family with sequence similarity 185 member A.
    
 0.884
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.