STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCN1GCN1 activator of EIF2AK4. (2678 aa)    
Predicted Functional Partners:
ABCF3
ATP binding cassette subfamily F member 3.
   
 0.985
EIF2AK4
Eukaryotic translation initiation factor 2 alpha kinase 4.
   
 0.958
DRG2
Developmentally regulated GTP binding protein 2.
   
 
 0.955
RPS15
Ribosomal protein S15.
   
 
 0.944
RPS13
Ribosomal protein S13.
   
 
 0.942
RPS3
Ribosomal protein S3.
   
 
 0.938
RPS20
Ribosomal protein S20.
   
   0.927
RPS12
Ribosomal protein S12.
   
   0.924
RPL5
Ribosomal protein L5.
   
 
 0.923
WDR31
WD repeat domain 31.
   
 
 0.923
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.