STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF185Ring finger protein 185. (194 aa)    
Predicted Functional Partners:
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
     
 0.856
DERL1
Derlin 1.
    
 0.851
CFTR
CF transmembrane conductance regulator.
    
 0.822
DERL3
Derlin 3.
    
 0.756
DERL2
Derlin 2.
    
 0.756
ERLIN1
ER lipid raft associated 1.
   
 0.751
ERLIN2
ER lipid raft associated 2.
   
 0.751
RNF121
Ring finger protein 121.
 
    
 0.731
SEL1L3
SEL1L family member 3.
     
 0.730
RPS27A
Ribosomal protein S27a.
    
  0.714
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.