STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPN3GPN-loop GTPase 3. (302 aa)    
Predicted Functional Partners:
GPN1
GPN-loop GTPase 1.
   
 
0.963
POLR2C
RNA polymerase II subunit C.
   
 
 0.886
RPAP2
RNA polymerase II associated protein 2.
    
 
 0.843
POLR2B
RNA polymerase II subunit B.
   
 
 0.814
POLR2L
RNA polymerase II subunit L.
    
 
 0.802
POLR2F
RNA polymerase II subunit F.
   
 
 0.793
POLR1C
RNA polymerase I and III subunit C.
   
 
 0.790
POLR2E
RNA polymerase II subunit E.
   
 
 0.768
NOL6
Nucleolar protein 6.
   
    0.762
ENSZALP00000007096
annotation not available
   
    0.755
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.