STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STAU1Staufen double-stranded RNA binding protein 1. (690 aa)    
Predicted Functional Partners:
DICER1
Dicer 1, ribonuclease III.
    
 0.979
DROSHA
Drosha ribonuclease III.
    
 0.939
STAU2
Staufen double-stranded RNA binding protein 2.
    
0.893
DHX9
DExH-box helicase 9.
    
 0.885
MRPL44
Mitochondrial ribosomal protein L44.
    
 0.872
CPEB1
Cytoplasmic polyadenylation element binding protein 1.
     
 0.856
UPF1
Regulator of nonsense transcripts 1.
    
 0.853
LSM14A
LSM14A mRNA processing body assembly factor.
    
 0.846
DGCR8
DGCR8 microprocessor complex subunit.
    
 0.832
FMR1
FMRP translational regulator 1.
    
 0.821
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.