STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIRT7Sirtuin 7. (217 aa)    
Predicted Functional Partners:
SIRT1
Sirtuin 1.
   
 0.885
KDM2A
Lysine demethylase 2A.
    
 0.875
KDM2B
Lysine demethylase 2B.
    
 0.875
SIRT5
Sirtuin 5.
   
 0.870
SIRT4
Sirtuin 4.
     
 0.832
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
 
    
 0.826
NUDT12
Nudix hydrolase 12.
   
 0.824
NADSYN1
NAD synthetase 1.
    
 0.791
NADK
NAD kinase.
  
 
 0.774
NMNAT2
Nicotinamide nucleotide adenylyltransferase 2.
   
 0.767
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.