STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC11ASEC11 homolog A, signal peptidase complex subunit. (153 aa)    
Predicted Functional Partners:
SPCS1
Signal peptidase complex subunit 1.
   
 0.999
SPCS2
Signal peptidase complex subunit 2.
   
 0.994
SEC11C
SEC11 homolog C, signal peptidase complex subunit.
  
  
 
0.950
SPCS3
Signal peptidase complex subunit 3.
   
 0.949
WDR24
WD repeat domain 24.
    
 0.759
WDR59
WD repeat domain 59.
    
 0.757
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 0.727
GRPR
Gastrin releasing peptide receptor.
     
 0.698
NMBR
Neuromedin B receptor.
     
 0.678
BRS3
Bombesin receptor subtype 3.
     
 0.675
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.