STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE4DIPPhosphodiesterase 4D interacting protein. (2179 aa)    
Predicted Functional Partners:
AKAP9
A-kinase anchoring protein 9.
    
 0.651
MAPRE1
Microtubule associated protein RP/EB family member 1.
    
 
 0.638
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
    
 
 0.576
KIFAP3
Kinesin associated protein 3.
     
 0.510
METTL11B
Methyltransferase like 11B.
      
 0.508
PLK4
Polo like kinase 4.
    
 0.498
PLK3
Polo like kinase 3.
    
 0.498
PLK1
Polo like kinase 1.
    
 0.498
PLK2
Polo like kinase 2.
    
 0.498
NID1
Nidogen 1.
   
 0.486
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.