STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C5General transcription factor IIIC subunit 5. (540 aa)    
Predicted Functional Partners:
GTF3C3
General transcription factor IIIC subunit 3.
   
 0.999
GTF3C1
General transcription factor IIIC subunit 1.
   
 0.981
GTF3C4
General transcription factor IIIC subunit 4.
   
 0.980
GTF3C6
General transcription factor IIIC subunit 6.
   
 0.967
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
    
 0.960
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
    
 0.956
TBP
TATA-box binding protein.
    
 0.827
TBPL2
TATA-box binding protein like 2.
    
 0.827
PIGK
Phosphatidylinositol glycan anchor biosynthesis class K.
     
 0.821
POLR3A
RNA polymerase III subunit A.
    
 0.793
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.