STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB41Erythrocyte membrane protein band 4.1. (716 aa)    
Predicted Functional Partners:
ENSZALP00000019868
annotation not available
 
      0.886
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.770
MPP1
Membrane palmitoylated protein 1.
   
 0.727
TMOD1
Tropomodulin 1.
    
 0.720
CADM1
Cell adhesion molecule 1.
    
 
 0.713
COPS5
COP9 signalosome subunit 5.
    
  0.673
GPS1
G protein pathway suppressor 1.
    
  0.673
HSPA5
Heat shock protein family A (Hsp70) member 5.
    
  0.671
COPS2
COP9 signalosome subunit 2.
    
  0.667
COPS8
COP9 signalosome subunit 8.
    
  0.664
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.