STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB34RAB34, member RAS oncogene family. (217 aa)    
Predicted Functional Partners:
GDI2
GDP dissociation inhibitor 2.
   
 0.886
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.856
ARL1
ADP ribosylation factor like GTPase 1.
   
 0.845
COG6
Component of oligomeric golgi complex 6.
   
 0.789
VPS53
VPS53 subunit of GARP complex.
    
 0.789
BICD2
BICD cargo adaptor 2.
    
 0.754
ENSZALP00000019003
annotation not available
    
 0.754
BICD1
BICD cargo adaptor 1.
    
 0.754
RANBP2
RANBP2 like and GRIP domain containing 4.
    
 0.753
VPS54
VPS54 subunit of GARP complex.
    
 0.749
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.