STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBOX5U-box domain containing 5. (480 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.913
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.907
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.875
YOD1
YOD1 deubiquitinase.
    
 
 0.869
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.868
UBQLN4
Ubiquilin 4.
    
 0.753
UBQLN1
Ubiquilin 1.
    
 0.753
UBE2O
Ubiquitin conjugating enzyme E2 O.
   
 0.731
SPATA5L1
Spermatogenesis associated 5 like 1.
  
 
 0.707
SPATA5
Spermatogenesis associated 5.
  
 
 0.707
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.