STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSZALP00000021928annotation not available (1026 aa)    
Predicted Functional Partners:
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
  0.614
CBX3
Chromobox 3.
    
 
 0.597
KDM2A
Lysine demethylase 2A.
   
  0.583
KDM2B
Lysine demethylase 2B.
   
  0.583
H3-3A
Histone H3.3.
    
 
 0.570
ENSZALP00000012921
annotation not available
    
 
 0.570
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.562
KDM6A
Lysine demethylase 6A.
    
  0.552
TRIM8
Tripartite motif containing 8.
      
 0.538
RPS27A
Ribosomal protein S27a.
    
  0.531
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.