STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSZALP00000022449annotation not available (305 aa)    
Predicted Functional Partners:
CWC27
CWC27 spliceosome associated cyclophilin.
    
 0.974
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.974
BUD13
BUD13 homolog.
    
 0.969
SF3B1
Splicing factor 3b subunit 1.
    
 0.968
SF3A1
Splicing factor 3a subunit 1.
    
 0.966
SNIP1
Smad nuclear interacting protein 1.
   
 0.964
ENSZALP00000012624
annotation not available
    
 0.962
SF3B3
Splicing factor 3b subunit 3.
    
 0.962
ENSZALP00000016906
annotation not available
   
 0.961
PRPF8
pre-mRNA processing factor 8.
    
 0.956
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.