PBRM1 protein (Zonotrichia albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PBRM1

Polybromo 1. (1723 aa)

Predicted Functional Partners:

ARID2

0.999

SMARCC1

0.998

SMARCA2

0.998

ACTL6A

0.997

SMARCB1

0.997

SMARCE1

0.996

PHF10

0.993

BRD7

0.992

MYSM1

0.990

SMARCD2

0.985

Your Current Organism:

Zonotrichia albicollis

NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTL6A	ARID2	ENSZALP00000006372	ENSZALP00000011539	Actin like 6A.	AT-rich interaction domain 2.	0.981
ACTL6A	BRD7	ENSZALP00000006372	ENSZALP00000009882	Actin like 6A.	Bromodomain containing 7.	0.971
ACTL6A	MYSM1	ENSZALP00000006372	ENSZALP00000003612	Actin like 6A.	Myb like, SWIRM and MPN domains 1.	0.999
ACTL6A	PBRM1	ENSZALP00000006372	ENSZALP00000022504	Actin like 6A.	Polybromo 1.	0.997
ACTL6A	PHF10	ENSZALP00000006372	ENSZALP00000002815	Actin like 6A.	PHD finger protein 10.	0.993
ACTL6A	SMARCA2	ENSZALP00000006372	ENSZALP00000020434	Actin like 6A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.996
ACTL6A	SMARCB1	ENSZALP00000006372	ENSZALP00000010144	Actin like 6A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.998
ACTL6A	SMARCC1	ENSZALP00000006372	ENSZALP00000006165	Actin like 6A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.	0.994
ACTL6A	SMARCD2	ENSZALP00000006372	ENSZALP00000008889	Actin like 6A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.	0.987
ACTL6A	SMARCE1	ENSZALP00000006372	ENSZALP00000005589	Actin like 6A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.994
ARID2	ACTL6A	ENSZALP00000011539	ENSZALP00000006372	AT-rich interaction domain 2.	Actin like 6A.	0.981
ARID2	BRD7	ENSZALP00000011539	ENSZALP00000009882	AT-rich interaction domain 2.	Bromodomain containing 7.	0.992
ARID2	MYSM1	ENSZALP00000011539	ENSZALP00000003612	AT-rich interaction domain 2.	Myb like, SWIRM and MPN domains 1.	0.970
ARID2	PBRM1	ENSZALP00000011539	ENSZALP00000022504	AT-rich interaction domain 2.	Polybromo 1.	0.999
ARID2	PHF10	ENSZALP00000011539	ENSZALP00000002815	AT-rich interaction domain 2.	PHD finger protein 10.	0.992
ARID2	SMARCA2	ENSZALP00000011539	ENSZALP00000020434	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.996
ARID2	SMARCB1	ENSZALP00000011539	ENSZALP00000010144	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.996
ARID2	SMARCC1	ENSZALP00000011539	ENSZALP00000006165	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.	0.995
ARID2	SMARCD2	ENSZALP00000011539	ENSZALP00000008889	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.	0.973
ARID2	SMARCE1	ENSZALP00000011539	ENSZALP00000005589	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.996