STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATS2LSpermatogenesis associated serine rich 2 like. (554 aa)    
Predicted Functional Partners:
FAT2
FAT atypical cadherin 2.
      
 0.468
ENSZALP00000007291
annotation not available
      
 0.461
SLITRK3
SLIT and NTRK like family member 3.
    
 
 0.446
TMEM51
Transmembrane protein 51.
      
 0.437
ENSZALP00000017704
annotation not available
      
 0.437
SUB1
SUB1 regulator of transcription.
      
 0.436
SLC2A13
Solute carrier family 2 member 13.
      
 0.429
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.