STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBBP7RB binding protein 7, chromatin remodeling factor. (424 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
   
 0.997
ARID4B
AT-rich interaction domain 4B.
   
 0.997
HAT1
Histone acetyltransferase 1.
   
 0.963
MORF4L1
Mortality factor 4 like 1.
   
 0.959
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.957
EED
Embryonic ectoderm development.
    
 0.953
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
    
 0.952
KDM2A
Lysine demethylase 2A.
    
 0.948
KDM2B
Lysine demethylase 2B.
    
 0.948
CHAF1B
Chromatin assembly factor 1 subunit B.
   
 0.947
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.