STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKH82589.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa)    
Predicted Functional Partners:
AKH85182.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.998
AKH85024.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.995
AKH84034.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.948
AKH84463.1
Diguanylate cyclase (GGDEF) domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.938
AKH86992.1
Metal-dependent phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.734
AKH85622.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.723
AKH86569.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.702
AKH85183.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.691
AKH85099.1
RNA polymerase sigma70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.628
AKH82588.1
Peptidase M6; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.594
Your Current Organism:
Streptomyces sp. CNQ509
NCBI taxonomy Id: 444103
Other names: S. sp. CNQ-509, Streptomyces sp. CNQ-509
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