Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKH81330.1 | AKH82660.1 | AA958_03095 | AA958_10955 | 30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology. | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.495 |
| AKH81330.1 | atpC | AA958_03095 | AA958_24880 | 30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.471 |
| AKH81330.1 | rplS | AA958_03095 | AA958_25940 | 30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.980 |
| AKH81330.1 | rpmF-2 | AA958_03095 | AA958_25840 | 30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. | 0.973 |
| AKH81330.1 | rpsO | AA958_03095 | AA958_26390 | 30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.995 |
| AKH81330.1 | rpsT | AA958_03095 | AA958_09395 | 30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.959 |
| AKH82660.1 | AKH81330.1 | AA958_10955 | AA958_03095 | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
| AKH82660.1 | AKH82662.1 | AA958_10955 | AA958_10965 | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.594 |
| AKH82660.1 | AKH82663.1 | AA958_10955 | AA958_10970 | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.594 |
| AKH82660.1 | AKH85182.1 | AA958_10955 | AA958_26455 | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.480 |
| AKH82660.1 | atpC | AA958_10955 | AA958_24880 | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.486 |
| AKH82660.1 | rplS | AA958_10955 | AA958_25940 | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.607 |
| AKH82660.1 | rpmF-2 | AA958_10955 | AA958_25840 | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. | 0.526 |
| AKH82660.1 | rpsO | AA958_10955 | AA958_26390 | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.693 |
| AKH82660.1 | rpsT | AA958_10955 | AA958_09395 | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.784 |
| AKH82660.1 | topA | AA958_10955 | AA958_14285 | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.504 |
| AKH82662.1 | AKH82660.1 | AA958_10965 | AA958_10955 | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.594 |
| AKH82662.1 | AKH82663.1 | AA958_10965 | AA958_10970 | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.803 |
| AKH82663.1 | AKH82660.1 | AA958_10970 | AA958_10955 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.594 |
| AKH82663.1 | AKH82662.1 | AA958_10970 | AA958_10965 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.803 |
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