STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKH83182.1Deoxyribonuclease HsdR; Derived by automated computational analysis using gene prediction method: Protein Homology. (1183 aa)    
Predicted Functional Partners:
AKH83187.1
N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
AKH82112.1
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.975
AKH83181.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.958
AKH84551.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.768
AKH86181.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.768
AKH83184.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.483
AKH83183.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.481
AKH82651.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.464
AKH83045.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.464
AKH83897.1
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.464
Your Current Organism:
Streptomyces sp. CNQ509
NCBI taxonomy Id: 444103
Other names: S. sp. CNQ-509, Streptomyces sp. CNQ-509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.