Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tneu_0188 | Tneu_0189 | PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pis:Pisl_1260 glycerophosphoryl diester phosphodiesterase. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pis:Pisl_1259 binding-protein-dependent transport systems inner membrane component. | 0.498 |
Tneu_0188 | Tneu_0190 | PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pis:Pisl_1260 glycerophosphoryl diester phosphodiesterase. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pis:Pisl_1258 ABC transporter related. | 0.498 |
Tneu_0189 | Tneu_0188 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pis:Pisl_1259 binding-protein-dependent transport systems inner membrane component. | PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pis:Pisl_1260 glycerophosphoryl diester phosphodiesterase. | 0.498 |
Tneu_0189 | Tneu_0190 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pis:Pisl_1259 binding-protein-dependent transport systems inner membrane component. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pis:Pisl_1258 ABC transporter related. | 0.949 |
Tneu_0189 | Tneu_0191 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pis:Pisl_1259 binding-protein-dependent transport systems inner membrane component. | KEGG: pis:Pisl_1257 hypothetical protein. | 0.709 |
Tneu_0190 | Tneu_0188 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pis:Pisl_1258 ABC transporter related. | PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pis:Pisl_1260 glycerophosphoryl diester phosphodiesterase. | 0.498 |
Tneu_0190 | Tneu_0189 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pis:Pisl_1258 ABC transporter related. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pis:Pisl_1259 binding-protein-dependent transport systems inner membrane component. | 0.949 |
Tneu_0190 | Tneu_0191 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pis:Pisl_1258 ABC transporter related. | KEGG: pis:Pisl_1257 hypothetical protein. | 0.479 |
Tneu_0191 | Tneu_0189 | KEGG: pis:Pisl_1257 hypothetical protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pis:Pisl_1259 binding-protein-dependent transport systems inner membrane component. | 0.709 |
Tneu_0191 | Tneu_0190 | KEGG: pis:Pisl_1257 hypothetical protein. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pis:Pisl_1258 ABC transporter related. | 0.479 |