STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tneu_0330PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pis:Pisl_0182 ABC transporter related. (255 aa)    
Predicted Functional Partners:
Tneu_0263
PFAM: ABC-3 protein; KEGG: pis:Pisl_1287 ABC-3 protein.
  
 
 0.970
Tneu_1888
PFAM: periplasmic solute binding protein; KEGG: pis:Pisl_0128 periplasmic solute binding protein.
  
  
 0.899
Tneu_0331
KEGG: pis:Pisl_0181 hypothetical protein.
       0.837
Tneu_0328
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; KEGG: pis:Pisl_0184 regulatory protein, ArsR.
  
  
 0.737
Tneu_0329
KEGG: pis:Pisl_0183 hypothetical protein.
       0.611
Tneu_1460
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: pis:Pisl_1023 ferric uptake regulator, Fur family.
  
  
 0.601
Tneu_0225
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pis:Pisl_1322 ABC transporter related.
 
    0.523
Tneu_1325
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pcl:Pcal_0683 ABC transporter related.
 
   
 0.505
Tneu_0333
PFAM: natural resistance-associated macrophage protein; KEGG: pcl:Pcal_1197 natural resistance-associated macrophage protein.
  
  
 0.495
Tneu_0978
PFAM: periplasmic binding protein; KEGG: pis:Pisl_0059 periplasmic binding protein.
     
 0.480
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.