Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tneu_0642 | Tneu_0643 | KEGG: pis:Pisl_1617 hypothetical protein. | KEGG: pai:PAE1549 hypothetical protein. | 0.575 |
Tneu_0642 | Tneu_0644 | KEGG: pis:Pisl_1617 hypothetical protein. | PFAM: major facilitator superfamily MFS_1; KEGG: pas:Pars_0660 major facilitator superfamily MFS_1. | 0.483 |
Tneu_0642 | Tneu_0645 | KEGG: pis:Pisl_1617 hypothetical protein. | Carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: pis:Pisl_1620 carbamate kinase; Belongs to the carbamate kinase family. | 0.455 |
Tneu_0643 | Tneu_0642 | KEGG: pai:PAE1549 hypothetical protein. | KEGG: pis:Pisl_1617 hypothetical protein. | 0.575 |
Tneu_0643 | Tneu_0644 | KEGG: pai:PAE1549 hypothetical protein. | PFAM: major facilitator superfamily MFS_1; KEGG: pas:Pars_0660 major facilitator superfamily MFS_1. | 0.650 |
Tneu_0643 | Tneu_0645 | KEGG: pai:PAE1549 hypothetical protein. | Carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: pis:Pisl_1620 carbamate kinase; Belongs to the carbamate kinase family. | 0.611 |
Tneu_0644 | Tneu_0642 | PFAM: major facilitator superfamily MFS_1; KEGG: pas:Pars_0660 major facilitator superfamily MFS_1. | KEGG: pis:Pisl_1617 hypothetical protein. | 0.483 |
Tneu_0644 | Tneu_0643 | PFAM: major facilitator superfamily MFS_1; KEGG: pas:Pars_0660 major facilitator superfamily MFS_1. | KEGG: pai:PAE1549 hypothetical protein. | 0.650 |
Tneu_0644 | Tneu_0645 | PFAM: major facilitator superfamily MFS_1; KEGG: pas:Pars_0660 major facilitator superfamily MFS_1. | Carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: pis:Pisl_1620 carbamate kinase; Belongs to the carbamate kinase family. | 0.733 |
Tneu_0645 | Tneu_0642 | Carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: pis:Pisl_1620 carbamate kinase; Belongs to the carbamate kinase family. | KEGG: pis:Pisl_1617 hypothetical protein. | 0.455 |
Tneu_0645 | Tneu_0643 | Carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: pis:Pisl_1620 carbamate kinase; Belongs to the carbamate kinase family. | KEGG: pai:PAE1549 hypothetical protein. | 0.611 |
Tneu_0645 | Tneu_0644 | Carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: pis:Pisl_1620 carbamate kinase; Belongs to the carbamate kinase family. | PFAM: major facilitator superfamily MFS_1; KEGG: pas:Pars_0660 major facilitator superfamily MFS_1. | 0.733 |