Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tneu_0716 | Tneu_0717 | KEGG: pas:Pars_2237 hypothetical protein. | PFAM: peptidase M50; KEGG: pis:Pisl_1696 peptidase M50. | 0.912 |
Tneu_0716 | Tneu_0718 | KEGG: pas:Pars_2237 hypothetical protein. | KEGG: pis:Pisl_1697 hypothetical protein. | 0.626 |
Tneu_0716 | Tneu_0719 | KEGG: pas:Pars_2237 hypothetical protein. | KEGG: pai:PAE1710 hypothetical protein. | 0.469 |
Tneu_0717 | Tneu_0716 | PFAM: peptidase M50; KEGG: pis:Pisl_1696 peptidase M50. | KEGG: pas:Pars_2237 hypothetical protein. | 0.912 |
Tneu_0717 | Tneu_0718 | PFAM: peptidase M50; KEGG: pis:Pisl_1696 peptidase M50. | KEGG: pis:Pisl_1697 hypothetical protein. | 0.634 |
Tneu_0717 | Tneu_0719 | PFAM: peptidase M50; KEGG: pis:Pisl_1696 peptidase M50. | KEGG: pai:PAE1710 hypothetical protein. | 0.568 |
Tneu_0718 | Tneu_0716 | KEGG: pis:Pisl_1697 hypothetical protein. | KEGG: pas:Pars_2237 hypothetical protein. | 0.626 |
Tneu_0718 | Tneu_0717 | KEGG: pis:Pisl_1697 hypothetical protein. | PFAM: peptidase M50; KEGG: pis:Pisl_1696 peptidase M50. | 0.634 |
Tneu_0718 | Tneu_0719 | KEGG: pis:Pisl_1697 hypothetical protein. | KEGG: pai:PAE1710 hypothetical protein. | 0.566 |
Tneu_0719 | Tneu_0716 | KEGG: pai:PAE1710 hypothetical protein. | KEGG: pas:Pars_2237 hypothetical protein. | 0.469 |
Tneu_0719 | Tneu_0717 | KEGG: pai:PAE1710 hypothetical protein. | PFAM: peptidase M50; KEGG: pis:Pisl_1696 peptidase M50. | 0.568 |
Tneu_0719 | Tneu_0718 | KEGG: pai:PAE1710 hypothetical protein. | KEGG: pis:Pisl_1697 hypothetical protein. | 0.566 |