Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tneu_0761TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: pis:Pisl_1745 FeS assembly protein SufB. (474 aa)    
Predicted Functional Partners:
Tneu_0760
KEGG: pis:Pisl_1744 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.998
Tneu_0952
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pis:Pisl_0037 ABC transporter related.
 
 
 0.969
Tneu_0125
KEGG: pai:PAE0932 hypothetical protein.
 
   
 0.705
Tneu_0762
KEGG: pis:Pisl_1746 hypothetical protein.
       0.689
Tneu_0763
TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: pis:Pisl_1747 alpha-L-glutamate ligases, RimK family.
       0.673
Tneu_1272
PFAM: protein of unknown function DUF59; KEGG: pis:Pisl_1848 protein of unknown function DUF59.
 
   
 0.404
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
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