STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tneu_1001PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pis:Pisl_0069 ATPase associated with various cellular activities, AAA_5. (474 aa)    
Predicted Functional Partners:
Tneu_1002
KEGG: pis:Pisl_0070 hypothetical protein.
       0.837
Tneu_1003
KEGG: pis:Pisl_0071 hypothetical protein.
       0.682
Tneu_1004
KEGG: pis:Pisl_0072 hypothetical protein.
       0.624
Tneu_1000
KEGG: pis:Pisl_0068 hypothetical protein.
       0.566
Tneu_0904
KEGG: pai:PAE3573 hypothetical protein.
  
     0.481
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
       0.468
Tneu_0367
KEGG: sto:ST0863 hypothetical protein.
 
     0.412
Tneu_0543
PFAM: MscS Mechanosensitive ion channel; KEGG: pis:Pisl_1431 MscS mechanosensitive ion channel.
 
     0.406
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.