Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tneu_1007PFAM: extracellular solute-binding protein family 1; KEGG: pis:Pisl_0075 extracellular solute-binding protein, family 1. (485 aa)    
Predicted Functional Partners:
Tneu_1008
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pis:Pisl_0076 binding-protein-dependent transport systems inner membrane component.
 
 
 0.983
Tneu_1009
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pis:Pisl_0077 ABC transporter related.
 
  
  0.855
Tneu_1088
KEGG: pis:Pisl_1959 putative thiamine transport system permease protein.
  
  
 0.719
Tneu_1005
PFAM: metallophosphoesterase; KEGG: pis:Pisl_0073 metallophosphoesterase.
 
     0.718
Tneu_1006
KEGG: pis:Pisl_0074 hypothetical protein.
     
 0.597
Tneu_1089
TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein family 1; KEGG: pis:Pisl_1958 ABC transporter, periplasmic binding protein, ThiB subfamily.
  
     0.481
Tneu_0978
PFAM: periplasmic binding protein; KEGG: pis:Pisl_0059 periplasmic binding protein.
 
  
 0.477
Tneu_1992
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: pis:Pisl_0674 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
  
     0.475
Tneu_0326
PFAM: Radical SAM domain protein; KEGG: pis:Pisl_0189 radical SAM domain protein.
 
     0.437
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.