STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tneu_1064PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pis:Pisl_1986 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (290 aa)    
Predicted Functional Partners:
Tneu_1062
PFAM: molydopterin dinucleotide-binding region; KEGG: pis:Pisl_1988 molydopterin dinucleotide-binding region.
 
 
 0.981
Tneu_1056
Formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pis:Pisl_1994 molybdopterin oxidoreductase.
 
 
 0.937
Tneu_1847
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pis:Pisl_0266 molybdopterin oxidoreductase.
 
 
 0.935
Tneu_0353
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pis:Pisl_0162 molybdopterin oxidoreductase.
 
 0.904
Tneu_1063
KEGG: pis:Pisl_1987 hypothetical protein.
       0.778
Tneu_1060
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pis:Pisl_1990 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
       0.773
Tneu_1061
KEGG: pis:Pisl_1989 hypothetical protein.
       0.773
Tneu_1058
KEGG: pis:Pisl_1992 formate dehydrogenase delta subunit.
  
  
 0.756
Tneu_1927
PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: pis:Pisl_0738 aldehyde ferredoxin oxidoreductase.
  
 
 0.688
Tneu_0174
PFAM: Aldehyde ferredoxin oxidoreductase; KEGG: pis:Pisl_1226 aldehyde ferredoxin oxidoreductase (aor).
  
 
 0.675
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
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