Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tneu_1102KEGG: cma:Cmaq_1562 hypothetical protein. (103 aa)    
Predicted Functional Partners:
Tneu_1100
PFAM: ABC-2 type transporter; KEGG: cma:Cmaq_1560 ABC-2 type transporter.
       0.833
Tneu_1101
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; KEGG: cma:Cmaq_1561 regulatory protein ArsR.
       0.786
Tneu_1099
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pas:Pars_0431 ABC transporter related.
       0.777
Tneu_1104
KEGG: cma:Cmaq_1564 hypothetical protein.
       0.532
Tneu_1097
Hypothetical protein.
       0.467
Tneu_1098
Hypothetical protein.
       0.467
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
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