STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tneu_1175TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; plasma-membrane proton-efflux P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mbn:Mboo_1257 ATPase, P-type (transporting), HAD superfamily, subfamily IC. (817 aa)    
Predicted Functional Partners:
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
  
 
 0.920
Tneu_0014
PFAM: H+transporting two-sector ATPase C subunit; KEGG: pis:Pisl_1052 H+-transporting two-sector ATPase, C subunit.
   
 0.671
Tneu_0244
PFAM: TrkA-C domain protein; KEGG: pis:Pisl_0882 TrkA-C domain protein.
  
  
 0.642
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
  
    0.624
Tneu_1178
Anthranilate synthase; PFAM: Chorismate binding-like; KEGG: pis:Pisl_1914 anthranilate synthase.
  
  
 0.614
Tneu_1180
TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; KEGG: pis:Pisl_1912 tryptophan synthase subunit alpha.
     
 0.586
Tneu_1889
KEGG: pis:Pisl_0127 sodium/calcium exchanger membrane region.
 
 
 0.583
Tneu_1179
TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: pis:Pisl_1913 anthranilate synthase component II.
     
 0.571
Tneu_0016
TIGRFAM: V-type ATPase, D subunit; PFAM: H+transporting two-sector ATPase D subunit; KEGG: pis:Pisl_1050 V-type ATPase, D subunit.
    
 0.567
Tneu_1992
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: pis:Pisl_0674 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
   
 
 0.567
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
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