STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tneu_1237PFAM: inner-membrane translocator; KEGG: xau:Xaut_1354 inner-membrane translocator. (301 aa)    
Predicted Functional Partners:
Tneu_1236
PFAM: inner-membrane translocator; KEGG: pna:Pnap_1906 inner-membrane translocator.
 
 
 0.991
Tneu_1238
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL100128 putative ATP-binding ABC transporter.
 
 
 0.988
Tneu_1239
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_1356 ABC transporter related.
 
 
 0.985
Tneu_0548
PFAM: inner-membrane translocator; KEGG: pis:Pisl_1523 inner-membrane translocator.
 
 
 0.945
Tneu_0546
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pis:Pisl_1521 ABC transporter related.
 
 
 0.940
Tneu_1804
PFAM: inner-membrane translocator; KEGG: pis:Pisl_0317 inner-membrane translocator.
 
 
 0.940
Tneu_1582
PFAM: inner-membrane translocator; KEGG: pis:Pisl_0591 inner-membrane translocator.
 
 
 0.939
Tneu_1235
KEGG: xau:Xaut_1352 extracellular ligand-binding receptor.
 
     0.937
Tneu_1584
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pai:PAE3354 branched-chain amino acid transport ATP-binding protein.
 
 
 0.936
Tneu_1586
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pis:Pisl_0503 ABC transporter related.
 
 
 0.935
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
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