STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tneu_1247KEGG: pas:Pars_1995 hypothetical protein. (222 aa)    
Predicted Functional Partners:
Tneu_1248
KEGG: pas:Pars_1996 hypothetical protein.
       0.773
Tneu_1249
KEGG: pai:PAE3397 hypothetical protein.
       0.655
Tneu_1246
KEGG: pis:Pisl_1874 hypothetical protein.
       0.642
Tneu_1250
KEGG: pas:Pars_1998 hypothetical protein.
       0.610
Tneu_0585
KEGG: pis:Pisl_1557 hypothetical protein.
  
  
 0.456
Tneu_1251
KEGG: pis:Pisl_1870 hypothetical protein.
       0.446
Tneu_1252
Conserved hypothetical protein; KEGG: pai:PAE3403 conserved within P.aerophilum.
       0.446
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.