STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tneu_1364PFAM: protein of unknown function DUF358; KEGG: pis:Pisl_0819 protein of unknown function DUF358. (163 aa)    
Predicted Functional Partners:
Tneu_1365
KEGG: pcl:Pcal_1091 ribosomal protein S26.
       0.837
Tneu_1363
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pis:Pisl_0818 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.752
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
       0.674
Tneu_1362
KEGG: pis:Pisl_0817 hypothetical protein.
       0.659
Tneu_1367
PFAM: tRNA methyltransferase complex GCD14 subunit; KEGG: pai:PAE2166 beta-aspartate methyltransferase (PimT), conjectural.
     
 0.610
pus10
THUMP domain protein; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs.
     
 0.539
Tneu_1368
KEGG: pcl:Pcal_0922 hypothetical protein.
       0.491
Tneu_1870
PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: pis:Pisl_1403 type II secretion system protein E.
   
    0.482
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.