STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tneu_1494KEGG: pis:Pisl_0627 hypothetical protein. (150 aa)    
Predicted Functional Partners:
Tneu_1493
PFAM: protein of unknown function UPF0126; KEGG: pis:Pisl_0628 protein of unknown function UPF0126.
       0.791
Tneu_1495
KEGG: pis:Pisl_0626 hypothetical protein.
       0.791
Tneu_1496
ABC transporter related; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; ABC transporter related; metal-binding domain in RNase L inhibitor, RLI; SMART: AAA ATPase; KEGG: pis:Pisl_0625 putative ATPase RIL.
       0.781
Tneu_1497
KEGG: pis:Pisl_0624 hypothetical protein.
       0.643
Tneu_1498
PFAM: glycosyl transferase family 2; KEGG: pas:Pars_1560 glycosyl transferase, family 2.
       0.643
Tneu_1499
PFAM: CopG domain protein DNA-binding domain protein; KEGG: pis:Pisl_0622 CopG domain protein DNA-binding domain protein.
       0.453
Tneu_1500
KEGG: pis:Pisl_0621 hypothetical protein.
       0.403
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.