Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tneu_1537 | Tneu_1538 | Tneu_1537 | Tneu_1538 | Protein of unknown function DUF265; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. | PFAM: Polyprenyl synthetase; KEGG: pis:Pisl_0549 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.725 |
Tneu_1537 | Tneu_1539 | Tneu_1537 | Tneu_1539 | Protein of unknown function DUF265; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. | KEGG: pai:PAE3295 hypothetical protein. | 0.517 |
Tneu_1538 | Tneu_1537 | Tneu_1538 | Tneu_1537 | PFAM: Polyprenyl synthetase; KEGG: pis:Pisl_0549 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Protein of unknown function DUF265; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. | 0.725 |
Tneu_1538 | Tneu_1539 | Tneu_1538 | Tneu_1539 | PFAM: Polyprenyl synthetase; KEGG: pis:Pisl_0549 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | KEGG: pai:PAE3295 hypothetical protein. | 0.630 |
Tneu_1538 | ribH | Tneu_1538 | Tneu_1540 | PFAM: Polyprenyl synthetase; KEGG: pis:Pisl_0549 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.537 |
Tneu_1539 | Tneu_1537 | Tneu_1539 | Tneu_1537 | KEGG: pai:PAE3295 hypothetical protein. | Protein of unknown function DUF265; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. | 0.517 |
Tneu_1539 | Tneu_1538 | Tneu_1539 | Tneu_1538 | KEGG: pai:PAE3295 hypothetical protein. | PFAM: Polyprenyl synthetase; KEGG: pis:Pisl_0549 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.630 |
Tneu_1539 | ribH | Tneu_1539 | Tneu_1540 | KEGG: pai:PAE3295 hypothetical protein. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.560 |
ribH | Tneu_1538 | Tneu_1540 | Tneu_1538 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | PFAM: Polyprenyl synthetase; KEGG: pis:Pisl_0549 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.537 |
ribH | Tneu_1539 | Tneu_1540 | Tneu_1539 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | KEGG: pai:PAE3295 hypothetical protein. | 0.560 |