STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX01560.1PFAM: protein of unknown function DUF6 transmembrane; UAA transporter; KEGG: cbf:CLI_1248 hypothetical protein. (299 aa)    
Predicted Functional Partners:
ABX01561.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: mvn:Mevan_1109 putative transcriptional regulator, XRE family.
  
  
 0.603
ABX01559.1
PFAM: protein of unknown function DUF434; KEGG: tko:TK1943 hypothetical protein.
  
    0.575
ABX00985.1
KEGG: mvn:Mevan_1597 hypothetical protein.
 
  
 0.454
ABX01232.1
PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mvn:Mevan_1221 sodium/hydrogen exchanger.
  
  
 0.435
Your Current Organism:
Methanococcus maripaludis C6
NCBI taxonomy Id: 444158
Other names: M. maripaludis C6, Methanococcus maripaludis str. C6, Methanococcus maripaludis strain C6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.