STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX01749.1KEGG: mvn:Mevan_1206 hypothetical protein. (267 aa)    
Predicted Functional Partners:
ABX01748.1
PFAM: Protein of unknown function UPF0113; KEGG: mvn:Mevan_1205 protein of unknown function UPF0113.
       0.872
ABX01750.1
PFAM: tRNA pseudouridine synthase D TruD; KEGG: mvn:Mevan_1207 tRNA pseudouridine synthase D TruD.
  
    0.817
ABX01747.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mvn:Mevan_1204 radical SAM domain protein.
       0.516
ABX01621.1
KEGG: mvn:Mevan_1151 hypothetical protein.
       0.439
Your Current Organism:
Methanococcus maripaludis C6
NCBI taxonomy Id: 444158
Other names: M. maripaludis C6, Methanococcus maripaludis str. C6, Methanococcus maripaludis strain C6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.