node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABX01522.1 | ABX02057.1 | MmarC6_0705 | MmarC6_1244 | SMART: RNA polymerase Rbp10; KEGG: mvn:Mevan_1261 RNA polymerase Rbp10. | TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: mvn:Mevan_0740 transcription termination factor Tfs; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
ABX01522.1 | ABX02123.1 | MmarC6_0705 | MmarC6_1310 | SMART: RNA polymerase Rbp10; KEGG: mvn:Mevan_1261 RNA polymerase Rbp10. | DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.978 |
ABX01522.1 | ABX02159.1 | MmarC6_0705 | MmarC6_1346 | SMART: RNA polymerase Rbp10; KEGG: mvn:Mevan_1261 RNA polymerase Rbp10. | PFAM: RNA polymerase Rpb6; KEGG: mvn:Mevan_0638 RNA polymerase Rpb6. | 0.999 |
ABX01522.1 | ABX02164.1 | MmarC6_0705 | MmarC6_1351 | SMART: RNA polymerase Rbp10; KEGG: mvn:Mevan_1261 RNA polymerase Rbp10. | PFAM: RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; KEGG: mvn:Mevan_0633 RNA polymerase insert. | 0.999 |
ABX01522.1 | rpoH | MmarC6_0705 | MmarC6_1313 | SMART: RNA polymerase Rbp10; KEGG: mvn:Mevan_1261 RNA polymerase Rbp10. | RNA polymerase Rpb5; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.999 |
ABX01522.1 | rpoL | MmarC6_0705 | MmarC6_0692 | SMART: RNA polymerase Rbp10; KEGG: mvn:Mevan_1261 RNA polymerase Rbp10. | RNA polymerase dimerisation; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoL/eukaryotic RPB11/RPC19 RNA polymerase subunit family. | 0.994 |
ABX01522.1 | rpoN | MmarC6_0705 | MmarC6_1347 | SMART: RNA polymerase Rbp10; KEGG: mvn:Mevan_1261 RNA polymerase Rbp10. | RNA polymerase, N/8 Kd subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.999 |
ABX01522.1 | tbp | MmarC6_0705 | MmarC6_0696 | SMART: RNA polymerase Rbp10; KEGG: mvn:Mevan_1261 RNA polymerase Rbp10. | TATA-box binding family protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.966 |
ABX01522.1 | tfb | MmarC6_0705 | MmarC6_0908 | SMART: RNA polymerase Rbp10; KEGG: mvn:Mevan_1261 RNA polymerase Rbp10. | Transcription factor TFIIB cyclin-related; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.987 |
ABX01522.1 | tfe | MmarC6_0705 | MmarC6_0913 | SMART: RNA polymerase Rbp10; KEGG: mvn:Mevan_1261 RNA polymerase Rbp10. | Transcription factor TFIIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongatio [...] | 0.982 |
ABX02057.1 | ABX01522.1 | MmarC6_1244 | MmarC6_0705 | TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: mvn:Mevan_0740 transcription termination factor Tfs; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | SMART: RNA polymerase Rbp10; KEGG: mvn:Mevan_1261 RNA polymerase Rbp10. | 0.999 |
ABX02057.1 | ABX02123.1 | MmarC6_1244 | MmarC6_1310 | TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: mvn:Mevan_0740 transcription termination factor Tfs; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.970 |
ABX02057.1 | ABX02159.1 | MmarC6_1244 | MmarC6_1346 | TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: mvn:Mevan_0740 transcription termination factor Tfs; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | PFAM: RNA polymerase Rpb6; KEGG: mvn:Mevan_0638 RNA polymerase Rpb6. | 0.999 |
ABX02057.1 | ABX02164.1 | MmarC6_1244 | MmarC6_1351 | TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: mvn:Mevan_0740 transcription termination factor Tfs; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | PFAM: RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; KEGG: mvn:Mevan_0633 RNA polymerase insert. | 0.998 |
ABX02057.1 | rpoH | MmarC6_1244 | MmarC6_1313 | TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: mvn:Mevan_0740 transcription termination factor Tfs; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RNA polymerase Rpb5; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.999 |
ABX02057.1 | rpoL | MmarC6_1244 | MmarC6_0692 | TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: mvn:Mevan_0740 transcription termination factor Tfs; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RNA polymerase dimerisation; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoL/eukaryotic RPB11/RPC19 RNA polymerase subunit family. | 0.990 |
ABX02057.1 | rpoN | MmarC6_1244 | MmarC6_1347 | TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: mvn:Mevan_0740 transcription termination factor Tfs; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RNA polymerase, N/8 Kd subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.999 |
ABX02057.1 | tbp | MmarC6_1244 | MmarC6_0696 | TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: mvn:Mevan_0740 transcription termination factor Tfs; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | TATA-box binding family protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.986 |
ABX02057.1 | tfb | MmarC6_1244 | MmarC6_0908 | TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: mvn:Mevan_0740 transcription termination factor Tfs; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Transcription factor TFIIB cyclin-related; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.987 |
ABX02057.1 | tfe | MmarC6_1244 | MmarC6_0913 | TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: mvn:Mevan_0740 transcription termination factor Tfs; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Transcription factor TFIIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongatio [...] | 0.973 |