STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX02267.1PFAM: LOR/SDH bifunctional protein conserved domain protein; KEGG: mvn:Mevan_0533 LOR/SDH bifunctional protein conserved domain protein. (415 aa)    
Predicted Functional Partners:
ABX02268.1
KEGG: mvn:Mevan_0532 hypothetical protein.
  
    0.920
hisC
KEGG: mvn:Mevan_0531 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II.
       0.651
pgk2
PFAM: ATP-cone domain protein; KEGG: mvn:Mevan_0742 ATP-cone domain protein.
  
    0.623
ABX02266.1
SMART: Helicase-like, DEXD box c2 type; helicase c2; DEAD-like helicases; KEGG: mvn:Mevan_0534 helicase C2.
       0.553
ABX02315.1
PFAM: SufBD protein; KEGG: mvn:Mevan_0489 SufBD protein.
   
    0.514
ABX01899.1
TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mvn:Mevan_0897 putative agmatinase; Belongs to the arginase family.
     
 0.501
ABX01327.1
PFAM: amino acid-binding ACT domain protein; KEGG: mvn:Mevan_1387 amino acid-binding ACT domain protein.
  
     0.462
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
       0.410
Your Current Organism:
Methanococcus maripaludis C6
NCBI taxonomy Id: 444158
Other names: M. maripaludis C6, Methanococcus maripaludis str. C6, Methanococcus maripaludis strain C6
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