STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabFPutative 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (418 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.995
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
  
  
 0.815
lipB
lipoyl-[acyl-carrier-protein]-protein-N- lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
    
 0.813
maeA
Putative NAD(P)-dependent malic enzyme; Predicted based on similarity to Pfam PF03949, COG COG0281, and related proteins in nr [COG0281; C].
  
 
 0.810
atpC
Putative ATP synthase F1, epsilon subunit; Predicted based on similarity to related proteins in nr [COG0355; C].
  
  
 0.809
thrA
Aspartokinase/homoserine dehydrogenase; Predicted based on similarity to Pfam PF00742, PF03447 and related proteins in nr [COG0527; E].
  
 
 0.681
ilvE
Branched-chain amino acid aminotransferase; Predicted based on similarity to related proteins in nr [COG0115; E]; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.612
korA
Putative 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit; Predicted based on similarity to Pfam PF01855 and related proteins in nr [COG0674; C].
   
  
 0.606
rpmF
50S ribosomal subunit protein L32; Predicted based on similarity to TIGRFAM equivalog TIGR01031 [COG0333; J]; Belongs to the bacterial ribosomal protein bL32 family.
  
  
 0.591
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.560
Your Current Organism:
Sulcia muelleri GWSS
NCBI taxonomy Id: 444179
Other names: C. Sulcia muelleri GWSS, Candidatus Sulcia muelleri GWSS, Candidatus Sulcia muelleri str. GWSS, Candidatus Sulcia muelleri strain GWSS
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