STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prsARibose-phosphate pyrophosphokinase; Predicted based on similarity to TIGRFAM TIGR01251 and related proteins in nr [COG0462; F]. (303 aa)    
Predicted Functional Partners:
sucA
2-oxoglutarate dehydrogenase, E1 component; Predicted based on similarity to TIGRFAM equivalog TIGR00239 [COG0567; C].
   
 0.999
acoB
Putative pyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.999
sucB
2-oxoglutarate dehydrogenase, E2 component; Predicted based on similarity to Pfam PF00364, PF00198 and related proteins in nr [COG0508; C].
   
 0.986
aceF
Dihydrolipoamide acyltransferase E2 component; Predicted based on similarity to Pfam PF00198 and related proteins in nr [COG0508; C].
   
 0.986
acoA
Pyruvate dehydrogenase E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 0.985
lpdA
Dihydrolipoamide dehydrogenase; Predicted based on similarity to COG COG1249 and related proteins in nr [COG1249; C].
   
 0.976
lpdA-2
Dihydrolipoamide dehydrogenase; Predicted based on similarity to COG COG1249 and related proteins in nr [COG1249; C].
   
 0.976
rplY
Ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
  
  
 0.949
maeA
Putative NAD(P)-dependent malic enzyme; Predicted based on similarity to Pfam PF03949, COG COG0281, and related proteins in nr [COG0281; C].
  
 
 0.901
glnS
glutaminyl-tRNA synthetase; Predicted based on similarity to TIGRFAM equivalog TIGR00440 [COG0008; J].
  
 
 0.859
Your Current Organism:
Sulcia muelleri GWSS
NCBI taxonomy Id: 444179
Other names: C. Sulcia muelleri GWSS, Candidatus Sulcia muelleri GWSS, Candidatus Sulcia muelleri str. GWSS, Candidatus Sulcia muelleri strain GWSS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.