Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atpA | atpB | SMGWSS_032 | SMGWSS_037 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | ATP synthase F0 subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.999 |
| atpA | atpD | SMGWSS_032 | SMGWSS_018 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.999 |
| atpA | atpE | SMGWSS_032 | SMGWSS_036 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | ATP synthase F0 subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpA | atpF | SMGWSS_032 | SMGWSS_035 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | ATP synthase F0 subunit b; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpA | atpG | SMGWSS_032 | SMGWSS_031 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | ATP synthase F1, gamma subunit; Predicted based on similarity to TIGRFAM equivalog TIGR01146 and related proteins in nr [COG022; C]. | 0.999 |
| atpA | atpH | SMGWSS_032 | SMGWSS_033 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Highly suspect ATP synthase F1, delta subunit; Predicted based on very weak similarity to related proteins in nr and on position in genome [COG0355; C]. | 0.976 |
| atpA | lysC | SMGWSS_032 | SMGWSS_038 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Putative aspartate kinase; Predicted based on similarity to related proteins in nr [COG052; E]; Belongs to the aspartokinase family. | 0.446 |
| atpB | atpA | SMGWSS_037 | SMGWSS_032 | ATP synthase F0 subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.999 |
| atpB | atpD | SMGWSS_037 | SMGWSS_018 | ATP synthase F0 subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.999 |
| atpB | atpE | SMGWSS_037 | SMGWSS_036 | ATP synthase F0 subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | ATP synthase F0 subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpB | atpF | SMGWSS_037 | SMGWSS_035 | ATP synthase F0 subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | ATP synthase F0 subunit b; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpB | atpG | SMGWSS_037 | SMGWSS_031 | ATP synthase F0 subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | ATP synthase F1, gamma subunit; Predicted based on similarity to TIGRFAM equivalog TIGR01146 and related proteins in nr [COG022; C]. | 0.999 |
| atpB | atpH | SMGWSS_037 | SMGWSS_033 | ATP synthase F0 subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Highly suspect ATP synthase F1, delta subunit; Predicted based on very weak similarity to related proteins in nr and on position in genome [COG0355; C]. | 0.965 |
| atpB | lysC | SMGWSS_037 | SMGWSS_038 | ATP synthase F0 subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Putative aspartate kinase; Predicted based on similarity to related proteins in nr [COG052; E]; Belongs to the aspartokinase family. | 0.484 |
| atpD | atpA | SMGWSS_018 | SMGWSS_032 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.999 |
| atpD | atpB | SMGWSS_018 | SMGWSS_037 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | ATP synthase F0 subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.999 |
| atpD | atpE | SMGWSS_018 | SMGWSS_036 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | ATP synthase F0 subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpD | atpF | SMGWSS_018 | SMGWSS_035 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | ATP synthase F0 subunit b; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpD | atpG | SMGWSS_018 | SMGWSS_031 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | ATP synthase F1, gamma subunit; Predicted based on similarity to TIGRFAM equivalog TIGR01146 and related proteins in nr [COG022; C]. | 0.999 |
| atpD | atpH | SMGWSS_018 | SMGWSS_033 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | Highly suspect ATP synthase F1, delta subunit; Predicted based on very weak similarity to related proteins in nr and on position in genome [COG0355; C]. | 0.900 |
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