STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS30557.1Hypothetical protein SMGWSS_149. (41 aa)    
Predicted Functional Partners:
ABS30556.1
Bifunctional; Predicted based on similarity to TIGRFAM equivalog TIGR00781, COG3278, and related proteins in nr [COG3278, COG2993; O]; Belongs to the heme-copper respiratory oxidase family.
       0.773
ABS30558.1
Cation transport ATPase, E1-E2 family protein; Predicted based on similarity to Pfam PF00122 and related proteins in nr [COG2217; P].
       0.705
ABS30554.1
Conserved hypothetical protein SMGWSS_146; Predicted based on similarity to related proteins in nr.
       0.453
ccoP
Putative cytochrome c oxidase, cbb3-type, ccoP subunit; Predicted based on similarity to related proteins in nr [COG2010; C].
       0.453
Your Current Organism:
Sulcia muelleri GWSS
NCBI taxonomy Id: 444179
Other names: C. Sulcia muelleri GWSS, Candidatus Sulcia muelleri GWSS, Candidatus Sulcia muelleri str. GWSS, Candidatus Sulcia muelleri strain GWSS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.