STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF36261.1tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)    
Predicted Functional Partners:
APF36067.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.950
APF36260.1
Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.918
APF35951.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.911
APF36259.1
Ubiquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.789
APF36263.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.684
APF36262.1
Hydroxymethylbilane synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.674
APF37210.1
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.638
APF38726.1
phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.638
APF36361.1
3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.608
APF36258.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.606
Your Current Organism:
Chelatococcus daeguensis
NCBI taxonomy Id: 444444
Other names: C. daeguensis, CCUG 54519, Chelatococcus daeguensis Yoon et al. 2008, KCTC 12979, strain K106
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