STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF37030.1Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)    
Predicted Functional Partners:
APF38931.1
Peptidase U35; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
APF38930.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.977
APF37027.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.930
APF37032.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.906
APF37035.1
Phage major tail protein, TP901-1 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.888
APF37034.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.838
APF37039.1
Glycoside hydrolase family 24; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.838
APF37040.1
Beta tubulin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.837
APF36716.1
Glycoside hydrolase family 24; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.836
APF36715.1
Beta tubulin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.830
Your Current Organism:
Chelatococcus daeguensis
NCBI taxonomy Id: 444444
Other names: C. daeguensis, CCUG 54519, Chelatococcus daeguensis Yoon et al. 2008, KCTC 12979, strain K106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.