STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF37199.1Phosphoribosylglycinamide formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)    
Predicted Functional Partners:
APF38958.1
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
APF37200.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.697
APF37201.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.697
APF38681.1
Deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.520
APF37202.1
DNA alkylation response protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.518
APF38209.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.461
APF38620.1
Secondary thiamine-phosphate synthase enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.408
APF37198.1
DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.403
Your Current Organism:
Chelatococcus daeguensis
NCBI taxonomy Id: 444444
Other names: C. daeguensis, CCUG 54519, Chelatococcus daeguensis Yoon et al. 2008, KCTC 12979, strain K106
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.