STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF37738.1Pantoate--beta-alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)    
Predicted Functional Partners:
APF37257.1
3-methyl-2-oxobutanoate hydroxymethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
APF36055.1
Type I pantothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.916
APF36836.1
Aspartate aminotransferase family protein; Catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.911
APF38740.1
Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.910
APF36000.1
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; in the alphaproteobacteria, this protein contains an N-terminal SbtC-like domain; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.909
APF36120.1
Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.901
APF39042.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.901
APF39038.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.568
APF37737.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
APF38965.1
Glutamine-hydrolyzing GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.551
Your Current Organism:
Chelatococcus daeguensis
NCBI taxonomy Id: 444444
Other names: C. daeguensis, CCUG 54519, Chelatococcus daeguensis Yoon et al. 2008, KCTC 12979, strain K106
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