STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF38636.1Phosphomethylpyrimidine synthase ThiC; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)    
Predicted Functional Partners:
APF37999.1
Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
thiG
Thiazole synthase; Functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.985
APF37998.1
Thiamine-phosphate diphosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.907
APF37513.1
Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.836
APF37707.1
Phosphoribosylformylglycinamidine cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.808
APF38292.1
5-(carboxyamino)imidazole ribonucleotide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.800
APF38723.1
Adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.789
APF37515.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.727
APF38274.1
Thiamine phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.690
APF37997.1
Hydroxyethylthiazole kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.681
Your Current Organism:
Chelatococcus daeguensis
NCBI taxonomy Id: 444444
Other names: C. daeguensis, CCUG 54519, Chelatococcus daeguensis Yoon et al. 2008, KCTC 12979, strain K106
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